Legend: * Sharing first or second authorship; # Corresponding authorship
Major Publications
Karamitopoulou E, Wenning AS, Acharjee A, Aeschbacher P, Marinoni I, Zlobec I, Gloor B, Perren A. Spatial heterogeneity of immune regulators drives dynamic changes of local immune responses, affecting disease outcomes in pancreatic cancer. Clin Cancer Res. 2024 Jul 15. doi: 10.1158/1078-0432.CCR-24-0368. Epub ahead of print. PMID: 39007872.
Acharjee A#, Okyere D, Nath D, Nagar S, Gkoutos GV. Network dynamics and therapeutic aspects of mRNA and protein markers with the recurrence sites of pancreatic cancer. Heliyon. 2024 May 17;10(10):e31437. doi: 10.1016/j.heliyon.2024.e31437. PMID: 38803850; PMCID: PMC11128524.
Onwuka S, Bravo-Merodio L, Gkoutos GV, Acharjee A#. Explainable AI-prioritized plasma and fecal metabolites in inflammatory bowel disease and their dietary associations. iScience. 2024 Jun 17;27(7):110298. doi: 10.1016/j.isci.2024.110298. PMID: 39040076; PMCID: PMC11261406.
Cusworth S, Gkoutos GV, Acharjee A#. A novel generative adversarial network modelling for the class imbalance problem in high dimensional omics data. BMC Med Inform Decis Mak. 2024 Mar 28;24(1):90. doi: 10.1186/s12911-024-02487-2. PMID: 38549123
Acharjee A#*, Wijesinghe SN*, Russ D, Gkoutos G, Jones SW. Cross-species transcriptomics identifies obesity associated genes between human and mouse studies. J Transl Med. 2024 Jun 25;22(1):592. doi: 10.1186/s12967-024-05414-1. PMID: 38918843; PMCID: PMC11197204.
Pal N*, Acharjee A*, Ament Z*, Dent T, Yavari A, Mahmod M, Ariga R, West J, Steeples V, Cassar M, Howell NJ, Lockstone H, Elliott K, Yavari P, Briggs W, Frenneaux M, Prendergast B, Dwight JS, Kharbanda R, Watkins H, Ashrafian H, Griffin JL. Metabolic profiling of aortic stenosis and hypertrophic cardiomyopathy identifies mechanistic contrasts in substrate utilization. FASEB J. 2024 Mar 31;38(6):e23505. doi: 10.1096/fj.202301710RR. PMID: 38507255.
Sadozai H*, Acharjee A*,#, Kayani HZ, Gruber T, Gorczynski RM, Burke B. High hypoxia status in pancreatic cancer is associated with multiple hallmarks of an immunosuppressive tumor microenvironment. Front Immunol. 2024 Mar 6;15:1360629. doi: 10.3389/fimmu.2024.1360629. PMID: 38510243; PMCID: PMC10951397.
Das A, Gkoutos GV, Acharjee A#. Analysis of translesion polymerases in colorectal cancer cells following cetuximab treatment: A network perspective. Cancer Med. 2024 Jan;13(1):e6945. doi: 10.1002/cam4.6945. PMID: 39102671; PMCID: PMC10809876.
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