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Imaging nanoscale nuclear structures with expansion microscopy, EL Faulkner, JA Pike, RM Densham, E Garlick, SG Thomas, RK Neely and JR Morris, Journal of Cell Science (2022) 135 (14), jcs25900912022
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An Alchemy of DNA: Exploring the Chemistry of Biology through Bioart, A Dumitriu and RK Neely, Leonardo (2021) 54 (2), 210-211
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FRET-based method for direct, real-time measurement of DNA methyltransferase activity, Y Long, K Ubych, E Jagu and RK Neely, Bioconjugate Chemistry (2020) 32 (1), 192-198
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An introduction to the methodology of expansion microscopy, Emma L. Faulkner, Steven G Thomas and Robert K. Neely, (2020), International Journal of Biochemistry and Cell Biology
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Site-selective and Re-writable Labeling of DNA through Enzymatic, Reversible and Click Chemistries, Andrew A. Wilkinson, Elodie Jagu, Krystian Ubych, Steven Coulthard, Ashleigh E. Rushton, Jack Kennefick, Qiang Su, Robert K. Neely and Paco Fernandez-Trillo, (2020), ACS Central Science, 6, 4, 525-534
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Evaluation of Direct Grafting Strategies via Trivalent Anchoring for Enabling Lipid Membrane and Cytoskeleton Staining in Expansion Microscopy, Gang Wen, Marisa Vanheusden, Aline Acke, Donato Vali, Robert K. Neely, Volker Leen, Johan Hofkens, (2020), ACS Nano
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DNA barcodes for rapid, whole genome, single-molecule analyses, Nathaniel Wand, Darren A Smith, Andrew Wilkinson, Ashleigh Rushton, Stephen J. W. Busby, Iain Styles, Robert K. Neely, Nucleic Acids Research, (2019), 47, e68.
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A general strategy for direct, enzyme-catalyzed conjugation of functional compounds to DNA, Jochem Deen, Su Wang, Sven Van Snick, Volker Leen, Kris Janssen, Johan Hofkens and Robert K Neely, Nucleic Acids Research, (2018), https://doi.org/10.1093/nar/gky184
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Methyltransferase-directed covalent coupling of fluorophores to DNA, Milena Helmer Lauer, Charlotte Vranken, Jochem Deen, Wout Frederickx, Willem Vanderlinden, Nathaniel Wand, Volker Leen, Marcelo H. Gehlen, Johan Hofkens and Robert K. Neely, Chemical Science, (2017), 8, 3804-3811, 10.1039/C6SC04229E
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Methyltransferase directed labeling of biomolecules and its applications, Jochem Deen, Charlotte Vranken, Volker Leen, Robert K. Neely, Kris P. F. Janssen, and Johan Hoefkens, Angewandte Chemie, (2017), 56, 19, 5182–5200, 10.1002/anie.201608625
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Human BRCA1-BARD1 ubiquitin ligase activity counteracts chromatin barriers to DNA resection, Ruth M Densham, Alexander J Garvin, Helen R Stone, Joanna Strachan, Robert A Baldock, Manuel Daza-Martin, Alice Fletcher, Sarah Blair-Reid, James Beesley, Balraj Johal, Laurence H Pearl, Robert Neely, Nicholas H Keep, Felicity Z Watts & Joanna R Morris, Nature Structural and Molecular Biology, (2016), 23, 647-655, 10.1038/nsmb.3236
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2-aminopurine as a fluorescent probe of DNA conformation and the DNA-enzyme interface, A. C. Jones and R. K. Neely, Quarterly Reviews of Biophysics, (2015) 48 (2), 244-279, DOI: 10.1017/S0033583514000158
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Combing of Genomic DNA from Droplets Containing Picograms of Material, Jochem Deen, Wouter Sempels, Raf De Dier, Jan Vermant, Peter Dedecker, Johan Hofkens, and Robert K. Neely, ACS Nano (2015), 9 (1), 809–816, DOI: 10.1021/nn5063497
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Super-resolution Optical DNA Mapping via DNA Methyltransferase-directed Click-chemistry, Charlotte Vranken, Jochem Deen, Lieve Dirix, Tim Stakenborg, Wim Dehaen, Volker Leen, Johan Hofkens and Robert K. Neely, (2014) Nucleic Acids Resarch, 42 (7): e50.
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Charlotte Vranken, Jochem Deen, Lieve Dirix, Tim Stakenborg, Wim Dehaen, Volker Leen, Johan Hofkens and Robert K. Neely, (2014) “Super-resolution Optical DNA Mapping via DNA Methyltransferase-directed Click-chemistry” Nucleic Acids Resarch, 42 (7): e50
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Douglas M Matje, Hongjun Zhou, Darren A. Smith, Robert K. Neely, David T.F. Dryden, Anita C Jones, Frederick Willis Dahlquist, and Norbert O. Reich (2013) “Enzyme Promoted Base Flipping Controls DNA Methylation Fidelity” Biochemistry, 52, 1677–1685
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Peter Dedecker , Sam Duwé , Robert K. Neely , Jin Zhang (2012) “Localizer: fast, accurate, open-source, and modular software package for superresolution microscopy” Journal of Biomedical Optics, 17, 126008.
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Robert K. Neely, Jochem Deen and Johan Hofkens (2011) “Optical mapping of DNA: Single-molecule-based methods for mapping genomes” Biopolymers,95, 298-311
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Robert K. Neely, Jun-ichi Hotta, Peter Dedecker, Giedre Urbanaviciute, Saulius Klimasauskas and Johan Hofkens (2010) “DNA fluorocode: A single molecule optical map of DNA with nanometer resolution” Chemical Science, 1, 453-460